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| Transfers |
 Grêmio 2,400,000 < >  Hartlepool United |
| XTI | > | WENDELL Nascimento Borges | LB | BRA | 64 | 97 | 26/07/93 (24) | 90 | 1.76 | 64 | Hartlepool United | | 17080 | | | | 0 | 0 | 3490 | 0 | +4 | |
| BOT | < | RODRIGO CAIO Coquette Russo | CB/DM | BRA | 61 | 8 | 17/08/93 (24) | 88 | 1.82 | 70 | Grêmio | | | | | | | | 2265 | | | |
| 175,000 < > Hartlepool United |
| MSS | > | RÚBEN Gonçalo Silva Nascimento VINAGRE | LB | POR | 45 | 85 | 09/04/99 (18) | 87 | | | Hartlepool United | | 430 | | | | 0 | 0 | 370 | 0 | Y | |
| 425,000 < > Barnsley |
| LJU | > | Tristan NYDAM | CM | ENG | 46 | 95 | 06/11/99 (17) | 88 | | | Barnsley | | 490 | | | | 0 | 0 | 730 | 0 | Y | |
 Arsenal < > 2,330,000 Barnsley |
| PFJ | < | Roman NEUSTÄDTER | DM/CB | RUS | 63 | 7 | 18/02/88 (29) | 91 | 1.90 | 82 | Arsenal | | | | | | | | 2225 | | | |
 Kilmarnock < > 920,000 Barnsley |
| IXR | < | Kyle McALLISTER | CM | SCO | 48 | 2 | 21/01/99 (18) | 92 | | | Kilmarnock | | | | | | | | 905 | | | |
| Tottenham Hotspur < > Tranmere Rovers |
| ENC | > | Nathan REDMOND | W/WS | ENG | 63 | 95 | 06/03/94 (23) | 94 | 1.72 | 74 | Tottenham Hotspur | | 15040 | | | | 0 | 0 | 5015 | 0 | +3 | (t.39, Tranmere Rovers) |
| Yeovil Town 7,600,000 < > Tranmere Rovers |
| QYU | > | Onyinye Wifred NDIDI | DM | NGA | 63 | 98 | 16/12/96 (20) | 92 | 1.84 | 70 | Tranmere Rovers | 7.15 | 15140 | | | | 0 | 0 | 4545 | 0 | +4 | |
| Stockport County < > FC Halifax |
| TQN | < | Rasmus NISSEN Kristensen | RB | DEN | 56/57 | 91 | 11/07/97 (20) | 78 | | | FC Halifax | | 3070 | | | | 0 | 0 | 1925 | 0 | Y | (t.39, Stockport County) |
| LKN | < | Mikkel DUELUND | St | DEN | 58 | 93 | 29/06/97 (20) | 87 | | | FC Halifax | | 3710 | | | | 0 | 0 | 3810 | 0 | Y | (t.39, Stockport County) |
| Bristol City < > FC Halifax |
| PPG | < | Rafik ZEKHNINI | St | NOR | 56 | 96 | 12/01/98 (19) | 82 | 1.79 | 63 | FC Halifax | | 2450 | | | | 0 | 0 | 3105 | 0 | Y | (t.39, Bristol City) |
| HMM | < | Alexander ISAK | St | SWE | 54 | 95 | 21/09/99 (18) | 86 | | | FC Halifax | | 1870 | | | | 0 | 0 | 2515 | 0 | Y | (t.39, Bristol City) |
 Valencia Mestalla < > 3,160,000 Portsmouth |
| LNW | < | JOSÉ RODRÍGUEZ Martínez | CM/RM | ESP | 54/58 | 0 | 16/12/94 (22) | 73 | 1.80 | 72 | Valencia Mestalla | | | | | | | | 2705 | | | |
| Vendsyssel < > 2,190,000 Crewe Alexandra |
| EDG | < | Kelvin LEERDAM | FB/DM | NED | 62 | 8 | 24/06/90 (27) | 92 | 1.78 | 70 | Vendsyssel | | | | | | | | 2200 | | | |
 Lanús < > 2,680,000 Cheltenham Town |
| GKF | < | Emiliano Buendia Stati, EMI | AM/RW | ARG | 55 | 2 | 25/12/96 (20) | 80 | 1.70 | 65 | Lanús | | | | | | | | 2115 | | | |
 Metz 13,100,000 < > Wrexham |
| BGE | > | Kai HAVERTZ | AM | GER | 60 | 84 | 11/06/99 (18) | 86 | 1.86 | 77 | Wrexham | | 4540 | | | | 0 | 0 | 5130 | 0 | Y | |
| Bristol City < > Wrexham |
| EDW | < | Rick VAN DRONGELEN | CB | NED | 57 | 99 | 20/12/98 (18) | 80 | 1.85 | 75 | Wrexham | | 2690 | | | | 0 | 0 | 2270 | 0 | Y | (t.39, Bristol City) |
| UQZ | < | Carles ALEÑA Castillo | AM | ESP | 54/56 | 95 | 05/01/98 (19) | 77 | 1.76 | 70 | Wrexham | | 1380 | | | | 0 | 0 | 2665 | 0 | Y | (t.39, Bristol City) |
| 125,000 < > Shrewsbury Town |
| ZLM | > | Javairô DILROSUN | LW | NED | 40 | 74 | 22/06/98 (19) | 92 | | | Shrewsbury Town | | 230 | | | | 0 | 0 | 230 | 0 | Y | |
| Nottingham Forest < > Shrewsbury Town |
| WEW | < | Felix PASSLACK | FB | GER | 58 | 87 | 29/05/98 (19) | 88 | 1.70 | 74 | Shrewsbury Town | | 2880 | | | | 0 | 0 | 2420 | 0 | Y | (t.33, Nottingham Forest) |
| LLB | < | Giovanni TROUPÉE | RB/CB | NED | 60 | 96 | 20/03/98 (19) | 92 | 1.80 | 72 | Shrewsbury Town | 7.33 | 4140 | | | | 1 | 0 | 3225 | 0 | Y | (t.33, Nottingham Forest) |
| Stalybridge Celt. < > Bury |
| WTC | < | Conor CHAPLIN | AM | ENG | 46 | 88 | 16/02/97 (20) | 97 | 1.78 | 69 | Bury | | 500 | | | | 0 | 0 | 550 | 0 | Y | (t.21, Stalybridge Celt.) |
 OH Leuven < > Port Vale |
| HEK | < | Jeff REINE-ADELAÏDE | AM/W | FRA | 48 | 94 | 17/01/98 (19) | 84 | 1.84 | 75 | Port Vale | | 670 | | | | 0 | 0 | 825 | 0 | Y | (t.39, OH Leuven) |
| St.Albans City < > 180,000 Blackburn Rovers |
| QFY | < | Scott WHARTON | CB | ENG | 42 | 8 | 03/10/97 (20) | 90 | | | St.Albans City | | | | | | | | 165 | | | |
| Huddersfield Town 7,250,000 < > Bristol Rovers |
| RHJ | > | JEMERSON de Jesus Nascimento | CB | BRA | 65 | 99 | 24/08/92 (25) | 87 | 1.84 | 77 | Bristol Rovers | 6.81 | 22900 | | | | 5 | 0 | 3815 | 1 | +3 | |
 Lazio < > 240,000 Peterborough Utd |
| XPR | < | Bradden INMAN | CM | AUS | 46 | 15 | 10/12/91 (25) | 90 | 1.85 | 79 | Lazio | | | | | | | | 290 | | | |
| Carlisle United < > 380,000 Peterborough Utd |
| VKI | < | Tom NICHOLS | WS | ENG | 47 | 93 | 01/09/93 (24) | 91 | 1.77 | 78 | Carlisle United | | 1150 | | | | 0 | 0 | 450 | 0 | +1 | |
| Scunthorpe United 5,250,000 < > Peterborough Utd |
| CPZ | > | Robert KENEDY Nunes do Nascimento | St | BRA | 58 | 94 | 08/02/96 (21) | 88 | 1.81 | 77 | Peterborough Utd | | 5590 | | | | 0 | 0 | 3475 | 0 | +3 | |
| Manchester United < > 50,000,000 Macclesfield Town |
| HRE | < | Emre CAN | DM/CM | GER | 65 | 96 | 12/01/94 (23) | 93 | 1.84 | 74 | Manchester United | 7.31 | 23900 | | | | 6 | 0 | 4520 | 1 | +1 | |
| PEC Zwolle < > 3,370,000 Blackpool |
| KOX | < | Leroy FER | CM/AM | NED | 63 | 1 | 05/01/90 (27) | 94 | 1.88 | 79 | PEC Zwolle | | | | | | | | 3745 | | | |
| Aberdeen < > 1,460,000 Mansfield Town |
| SOM | < | Steven FLETCHER | CS | SCO | 57 | 1 | 26/03/87 (30) | 96 | 1.85 | 76 | Aberdeen | | | | | | | | 1435 | | | |
| Atalanta 9,000,000 < > Mansfield Town |
| GJR | > | Alessandro BASTONI | CB | ITA | 47 | 98 | 13/04/99 (18) | 85 | | | Mansfield Town | | 550 | | | | 0 | 0 | 515 | 0 | Y | |
| LUD | > | Alessandro MALLAMO | AM/RW | ITA | 40 | 84 | 22/03/99 (18) | 91 | | | Mansfield Town | | 220 | | | | 0 | 0 | 260 | 0 | Y | |
| GJL | > | Roberto GAGLIARDINI | CM | ITA | 63 | 90 | 07/04/94 (23) | 92 | 1.88 | 77 | Mansfield Town | | 14640 | | | | 0 | 0 | 5015 | 0 | +3 | |
 Ankaragücü < > 1,780,000 Manchester United |
| HAY | < | CANER Erkin | LWB/LM | TUR | 61 | 10 | 04/10/88 (29) | 89 | 1.77 | 75 | Ankaragücü | | | | | | | | 1655 | | | |
 Lugano < > 3,590,000 Ipswich Town |
| PKO | < | Josip DRMIC | St | SUI | 61 | 8 | 08/08/92 (25) | 90 | 1.82 | 70 | Lugano | | | | | | | | 3670 | | | |
| Nantes < > 1,800,000 Luton Town |
| WKH | < | Lukman HARUNA | CM/AM | NGA | 58 | 5 | 04/12/90 (26) | 93 | 1.77 | 75 | Nantes | | | | | | | | 1905 | | | |
 Tigres < > 3,000,000 Newcastle United |
| UWB | < | Benjamin STAMBOULI | DM/CB | FRA | 63 | 1 | 13/08/90 (27) | 89 | 1.80 | 75 | Tigres | | | | | | | | 2545 | | | |
| Córdoba 1,225,000 < > Chelsea |
| BHW | > | Weston McKENNIE | CM/AM | USA | 48 | 74 | 28/08/98 (19) | 92 | | | Chelsea | | 760 | | | | 0 | 0 | 825 | 0 | Y | |
| Celtic 1,050,000 < > Chelsea |
| HGI | > | Tony RALSTON | RB | SCO | 49 | 97 | 16/11/98 (18) | 94 | | | Chelsea | | 920 | | | | 0 | 0 | 700 | 0 | Y | |
| Loan/transfer listed |
| WAY | - | Alexander FRANSSON | CM | SWE | 59/60 | 89 | 02/04/94 (23) | 78 | 1.80 | 74 | FC Halifax | | 4670 | | | T | 0 | 0 | 3245 | 0 | +2 | |
| IID | - | Matz SELS | Gk | BEL | 57 | 95 | 26/02/92 (25) | 88 | 1.91 | 75 | Bristol Rovers | | 9020 | | | T | 0 | 0 | 1385 | 0 | +1 | |
| GWC | - | Aymen BARKOK | RWB/CM | GER | 58 | 88 | 21/05/98 (19) | 88 | 1.88 | 75 | Chelsea | | 3280 | | | T | 0 | 0 | 2420 | 0 | Y | |
| WNX | - | BERNARDO Fernandes da Silva Junior | FB/DM | BRA | 62 | 98 | 14/05/95 (22) | 81 | 1.86 | 76 | Chelsea | | 7626 | | | T | 0 | 0 | 3280 | 0 | +2 | |
| Released |
| DZF | 16 | Xabier Quintilla Guasch, XAVI QUINTILLÁ | LB | ESP | 40 | 13 | 23/08/96 (21) | 86 | | | Kidderminster H. | | | | | | | | 85 | | | |
| ITX | 16 | Marek CECH | LB/LM | SVK | 51/52 | 15 | 26/01/83 (34) | 78 | 1.83 | 74 | Pisa | | | | | | | | 25 | | | |
| LUN | 16 | Glen JOHNSON | WB | ENG | 62 | 11 | 23/08/84 (33) | 92 | 1.78 | 70 | Stoke City | | | | | | | | 890 | | | |
| ZER | 25+ | Harrison McGAHEY | CB | ENG | 47 | 5 | 26/09/95 (22) | 92 | 1.87 | 85 | East Fife | | | | | | | | 325 | | | |
| ECP | 16 | Artjoms RUDNEVS | St | LVA | 60 | 15 | 13/01/88 (29) | 89 | 1.83 | 81 | (retired) | | | | | | | | 2445 | | | |
| Loan callbacks |
| PAL | - | Timothy FOSU-MENSAH | CB/FB | NED | 58 | 98 | 02/01/98 (19) | 87 | 1.91 | 79 | Wrexham | 6.64 | 1880 | | | | 1 | 0 | 2420 | 0 | Y | |
| XTF | - | Matthijs DE LIGT | CB/CM | NED | 58 | 98 | 12/08/99 (18) | 87 | | | Wrexham | 6.56 | 2910 | | | | 3 | 0 | 2620 | 0 | Y | |
| HNK | - | Hidde TER AVEST | RB/CB | NED | 61 | 93 | 20/05/97 (20) | 80 | 1.81 | 75 | Shrewsbury Town | | 5020 | | | | 2 | 0 | 3425 | 0 | Y | |
| EBD | - | Donny VAN DE BEEK | DM | NED | 55/59 | 95 | 18/04/97 (20) | 74 | 1.81 | 67 | Shrewsbury Town | | 3530 | | | | 0 | 0 | 2570 | 0 | Y | |
| YCN | - | Ben KENNEDY | CM | NIR | 44 | 98 | 12/01/97 (20) | 87 | 1.78 | 70 | Bury | | 400 | | | | 0 | 0 | 400 | 0 | Y | |
