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| Transfers |
350,000 < >  Portsmouth |
| UEC | > | Gareth EVANS | CS | ENG | 47 | 97 | 26/04/88 (30) | 95 | 1.82 | 79 | Portsmouth | | 1030 | | | | 0 | 0 | 265 | 0 | | |
| 600,000 < > Portsmouth |
| OJG | > | Anton WALKES | DM | ENG | 48 | 91 | 08/02/97 (21) | 98 | 1.87 | 83 | Portsmouth | | 1330 | | | | 0 | 0 | 440 | 0 | | |
| 500,000 < > Portsmouth |
| XQS | > | Matt CLARKE | CB/DM | ENG | 48 | 75 | 22/09/96 (22) | 90 | 1.80 | 70 | Portsmouth | | 1170 | | | | 0 | 0 | 385 | 0 | | |
| 330,000 < > Northampton Town |
| YPX | > | Sam HOSKINS | WS | ENG | 44 | 88 | 04/02/93 (25) | 90 | 1.72 | 66 | Northampton Town | | 720 | | | | 0 | 0 | 245 | 0 | | |
| 280,000 < > Northampton Town |
| LCS | < | Morgan ROBERTS | LW | ENG | 38 | 91 | 22/12/00 (117) | 94 | | | Northampton Town | | 320 | | | | 0 | 0 | 205 | 0 | | |
| 500,000 < > Northampton Town |
| ZMJ | < | Shaun McWILLIAMS | CM | ENG | 43 | 80 | 14/08/98 (20) | 93 | 1.83 | 68 | Northampton Town | | 630 | | | | 0 | 0 | 340 | 0 | | |
 Stirling Albion 550,000 < > Shrewsbury Town |
| MJS | > | Lee ANGOL | St | ENG | 46 | 97 | 04/08/94 (24) | 91 | 1.77 | 71 | Shrewsbury Town | | 940 | | | | 0 | 0 | 380 | 0 | | |
| 700,000 < > Shrewsbury Town |
| VGV | > | Alex GILLIEAD | CS/RW | ENG | 46 | 89 | 11/02/96 (22) | 92 | 1.83 | 70 | Shrewsbury Town | | 1000 | | | | 0 | 0 | 515 | 0 | | |
 Sporting 1,000,000 < > Shrewsbury Town |
| BUU | > | Greg DOCHERTY | CM | SCO | 49 | 77 | 10/09/96 (22) | 95 | 1.77 | 72 | Shrewsbury Town | | 1430 | | | | 0 | 0 | 700 | 0 | | |
| 1,500,000 < > Leeds United |
| FHD | > | Tyler ROBERTS | CS | WAL | 58 | 97 | 12/01/99 (19) | 89 | 1.80 | 75 | Leeds United | | 1450 | | | | 0 | 0 | 1020 | 0 | | |
| 1,200,000 < > Leeds United |
| VHK | < | Conor SHAUGHNESSY | CM/DM | IRL | 50 | 89 | 30/06/96 (22) | 89 | 1.91 | 74 | Leeds United | | 1830 | | | | 0 | 0 | 820 | 0 | | |
| 440,000 < > Leeds United |
| DBH | < | Jamie SHACKLETON | RWB/CM | ENG | 45 | 60 | 08/10/99 (19) | 89 | | | Leeds United | | 790 | | | | 0 | 0 | 335 | 0 | | |
| 1,000,000 < > Blackburn Rovers |
| JVG | > | Dominic SAMUEL | CS | ENG | 49 | 88 | 01/04/94 (24) | 98 | 1.82 | 89 | Blackburn Rovers | | 1360 | | | | 0 | 0 | 630 | 0 | | |
 FC København 3,000,000 < > Blackburn Rovers |
| QGI | > | Adam ARMSTRONG | CS | ENG | 54 | 87 | 10/02/97 (21) | 96 | 1.72 | 69 | Blackburn Rovers | | 3150 | | | | 0 | 0 | 1935 | 0 | | |
| 990,000 < > Blackburn Rovers |
| PHP | > | Jacob DAVENPORT | DM | ENG | 49 | 95 | 28/12/98 (19) | 91 | | | Blackburn Rovers | | 1520 | | | | 0 | 0 | 640 | 0 | | |
 Atromitos 1,320,000 < > Burton Albion |
| LSK | > | Jake BIDWELL | LB | ENG | 56 | 76 | 21/03/93 (25) | 95 | 1.83 | 70 | Burton Albion | | 4030 | | | | 0 | 0 | 1010 | 0 | +1 | |
 Almere City 5,880,000 < > Scunthorpe United |
| IKL | > | Vincent JANSSEN | CS | NED | 62 | 90 | 15/06/94 (24) | 92 | 1.80 | 79 | Scunthorpe United | | 11660 | | | | 0 | 0 | 4490 | 0 | +1 | |
| Released |
| GSV | 16 | John TERRY | CB | ENG | 58 | 1 | 07/12/80 (37) | 93 | 1.85 | 88 | (retired) | | | | | | | | F/t | | | |
| FAT | 16 | Stephen DARBY | RB | ENG | 48 | 13 | 06/10/88 (30) | 90 | 1.72 | 60 | York City | | | | | | | | 150 | | | |
| RHK | 16 | Ronaldo de Assis Moreira, RONALDINHO | AM/WS | BRA | 63 | 15 | 21/03/80 (38) | 85 | 1.81 | 76 | JEF United | | | | | | | | F/t | | | |
| ALP | 16 | Karim MATMOUR | W/WS | ALG | 52 | 10 | 25/06/85 (33) | 87 | 1.81 | 75 | Rot-Weiss Erfurt | | | | | | | | 215 | | | |
