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| Transfers |
725,000 < >  FC Basel |
| FSN | > | SALIH Ucan | CM/AM | TUR | 52 | 87 | 06/01/94 (20) | 92 | 1.82 | 65 | FC Basel | | 1420 | | | | 0 | 0 | 1365 | 0 | Y | |
| 390,000 < > FC Basel |
| IFX | > | Bertrand TRAORÉ | CM/AM | BFA | 47 | 97 | 06/09/95 (18) | 93 | | | FC Basel | | 600 | | | | 0 | 0 | 780 | 0 | Y | |
| 455,000 < > FC Basel |
| FIX | > | CARLOS FERNÁNDEZ Luna | St | ESP | 47 | 70 | 22/05/96 (18) | 90 | | | FC Basel | | 570 | | | | 0 | 0 | 915 | 0 | Y | |
 Livingston 1,715,000 < >  Exeter City |
| OYN | > | Kieran TRIPPIER | RB | ENG | 56 | 74 | 19/09/90 (23) | 94 | 1.77 | 69 | Exeter City | | 4250 | | | | 0 | 0 | 1220 | 0 | +2 | |
| Huddersfield Town 3,050,000 < > Exeter City |
| PCC | > | Daniel DRINKWATER | CM/RM | ENG | 58 | 68 | 05/03/90 (24) | 94 | 1.77 | 69 | Exeter City | | 6020 | | | | 0 | 0 | 2140 | 0 | +2 | |
Zaragoza 7,500,000 < >  Milan |
| JRQ | > | ANDER Herrera | CM/AM | ESP | 64 | 97 | 14/08/89 (24) | 88 | 1.81 | 68 | Milan | | 17480 | | | | 0 | 0 | 5145 | 0 | +2 | |
| Grasshoppers 6,000,000 < > Milan |
| OWD | > | Serge AURIER | CB/FB | CIV | 63 | 98 | 24/12/92 (21) | 94 | 1.74 | 75 | Milan | 6.90 | 15140 | | | | 0 | 0 | 4165 | 0 | +2 | |
 Bayern München 5,200,000 < > Milan |
| NJU | > | Dejan LOVREN | CB | CRO | 64 | 95 | 05/07/89 (24) | 91 | 1.88 | 84 | Milan | | 16480 | | | | 1 | 0 | 3490 | 0 | +2 | |
 AaB < > 2,990,000  Helsingborg |
| JKM | < | Lucas ANDERSEN | W/AM | DEN | 52/55 | 6 | 13/09/94 (19) | 75 | 1.85 | 72 | AaB | | | | | | | | 2305 | | | |
| Cardiff City < > 400,000 Accrington Stanley |
| OFS | < | Danny POTTS | LB | ENG | 49 | 7 | 13/04/94 (20) | 87 | 1.72 | 69 | Cardiff City | | | | | | | | 580 | | | |
 1.FC Slovácko 1,200,000 < > Viktoria Plzen |
| PBD | > | Marek HAVLÍK | DM | CZE | 49 | 77 | 08/07/95 (18) | 96 | 1.78 | 71 | Viktoria Plzen | | 820 | | | | 0 | 0 | 700 | 0 | Y | |
| Slovan Liberec 700,000 < > Viktoria Plzen |
| PGG | > | Lukás POKORNY | CB | CZE | 45 | 99 | 05/07/93 (20) | 95 | 1.86 | 85 | Viktoria Plzen | | 480 | | | | 0 | 0 | 295 | 0 | Y | |
| Marila Príbram 2,000,000 < > Viktoria Plzen |
| PRO | > | Lukas STRATIL | CS | CZE | 50 | 88 | 29/01/94 (20) | 95 | 1.77 | 64 | Viktoria Plzen | | 960 | | | | 0 | 0 | 1185 | 0 | Y | |
TSG Hoffenheim 6,000,000 < >  FC Porto |
| UPC | > | LUIS GUSTAVO Dias | DM | BRA | 66 | 95 | 23/07/87 (26) | 94 | 1.87 | 78 | FC Porto | | 28720 | | | | 4 | 0 | 4150 | 0 | +2 | |
| Corinthians 5,000,000 < > FC Porto |
| KOY | > | LEANDRO CASTAN da Silva | CB | BRA | 65 | 96 | 05/11/86 (27) | 92 | 1.84 | 71 | FC Porto | | 21000 | | | | 0 | 0 | 3395 | 0 | +2 | |
 Panathinaikos 7,500,000 < > FC Porto |
| PTU | > | LUIZÃO | CB | BRA | 65 | 95 | 13/02/81 (33) | 93 | 1.92 | 81 | FC Porto | 6.92 | 19500 | | | | 2 | 0 | 1420 | 1 | +2 | |
| ECV | > | Fábio COENTRÃO | LWB/CM | POR | 65 | 95 | 11/03/88 (26) | 93 | 1.78 | 66 | FC Porto | 7.67 | 21600 | | | | 1 | 0 | 3605 | 0 | +2 | |
| Crystal Palace 4,100,000 < > Ayr United |
| VLL | > | Nathaniel CLYNE | RWB | ENG | 62 | 97 | 05/04/91 (23) | 90 | 1.75 | 66 | Ayr United | | 11160 | | | | 0 | 0 | 2950 | 0 | +3 | |
| Burnley < > 2,180,000 Ayr United |
| SXN | < | Ryan TUNNICLIFFE | CM | ENG | 56 | 2 | 30/12/92 (21) | 89 | 1.82 | 90 | Burnley | | | | | | | | 2230 | | | |
 Auxerre < > Nantes |
| NUC | < | Neal MAUPAY | WS | FRA | 54 | 90 | 14/08/96 (17) | 85 | 1.71 | 69 | Nantes | | 1660 | | | | 0 | 0 | 2715 | 0 | Y | (t.36, Auxerre) |
 Feyenoord 7,250,000 < > Ajax |
| OVZ | > | Stefan DE VRIJ | CB/RB | NED | 64 | 99 | 05/02/92 (22) | 93 | 1.89 | 75 | Ajax | 7.43 | 16680 | | | | 3 | 0 | 4355 | 2 | +2 | |
| SC Heerenveen 6,350,000 < > Ajax |
| UBV | > | Daryl JANMAAT | RWB | NED | 64 | 99 | 22/07/89 (24) | 97 | 1.85 | 65 | Ajax | | 18380 | | | | 0 | 0 | 3490 | 0 | +2 | |
| FC Twente 5,600,000 < > Ajax |
| KFU | > | Tim KRUL | Gk | NED | 64 | 95 | 03/04/88 (26) | 93 | 1.90 | 75 | Ajax | | 16880 | | | | 2 | 0 | 3440 | 0 | +2 | |
| Rotherham United < > 2,450,000 Brøndby |
| FPO | < | Stewart DOWNING | W | ENG | 62 | 14 | 22/07/84 (29) | 92 | 1.82 | 69 | Rotherham United | | | | | | | | 2825 | | | |
| FC Midtjylland < > 2,350,000 Brøndby |
| FSA | < | Michael KROHN-DEHLI | W | DEN | 62 | 11 | 06/06/83 (31) | 95 | 1.70 | 68 | FC Midtjylland | | | | | | | | 2425 | | | |
| Bologna 4,075,000 < > Inter |
| QET | > | Miguel BRITOS | CB | URU | 65 | 88 | 17/07/85 (28) | 95 | 1.88 | 82 | Inter | | 20300 | | | | 0 | 0 | 3185 | 0 | +1 | |
| Loan/transfer listed |
| DCK | - | VITOLO | LW | ESP | 59/60 | 95 | 02/11/89 (24) | 79 | 1.83 | 80 | Baník Ostrava | | 2170 | | | T | 0 | 0 | 2880 | 0 | +1 | |
| RQK | - | Nicky CLARK | CS | SCO | 49 | 94 | 03/06/91 (23) | 87 | | | Ayr United | | 530 | | | T | 1 | 0 | 725 | 0 | | |
| Released |
| WLM | 16 | Michael FALKESGAARD | Gk | DEN | 41 | 2 | 09/04/91 (23) | 87 | | | Brøndby | | | | | | | | 105 | | | |
| Loan callbacks |
| EJY | 25+ | Declan JOHN | LWB | WAL | 56 | 90 | 30/06/95 (19) | 82 | | | Newport County | | 2450 | | | | 0 | 0 | 1965 | 0 | Y | |
