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| Transfers |
 Carlisle United < > 410,000 Hull City |
| IFU | < | Nathan BAXTER | Gk | ENG | 49 | 95 | 08/11/98 (26) | 91 | 1.93 | 74 | Carlisle United | | 1460 | | | | 0 | 0 | 345 | 0 | +2 | |
| QPR < > 1,580,000 Hull City |
| DEW | < | Leighton CLARKSON | CM | ENG | 55 | 94 | 19/10/01 (23) | 93 | | | QPR | 6.86 | 3740 | | | | 3 | 1 | 1550 | 6 | +3 | |
| MK Dons < > 180,000 Birmingham City |
| VQF | < | Connor MAHONEY | W | ENG | 45 | 94 | 12/02/97 (28) | 89 | 1.78 | 74 | MK Dons | 7.00 | 800 | | | | 3 | 0 | 175 | 0 | +1 | |
| Swansea City < > 170,000 Birmingham City |
| XMM | < | Marcel OAKLEY | RB/CB | ENG | 46 | 95 | 30/10/02 (22) | 89 | | | Swansea City | 6.38 | 1010 | | | | 1 | 0 | 270 | 0 | +3 | |
| Doncaster Rovers 7,250,000 < > Stockport County |
| LQO | > | Tyrick MITCHELL | LWB | ENG | 64 | 86 | 01/09/99 (26) | 91 | 1.74 | 66 | Stockport County | 7.32 | 16180 | 4 | | | 3 | 0 | 3125 | 10 | +2 | |
| Plymouth Argyle 6,000,000 < > Stockport County | Tribunal [A] |
| DND | > | Mason MOUNT | AM/CM | ENG | 63 | 93 | 10/01/99 (26) | 82 | 1.78 | 64 | Plymouth Argyle | 6.56 | 17480 | | | T | 3 | 0 | 3980 | 1 | +1 | |
| Stockport County < > 6,500,000 Barnsley | Tribunal [B] |
| ELA | < | Roméo LAVIA | DM | BEL | 61 | 90 | 06/01/04 (21) | 89 | 1.81 | 76 | Barnsley | | 10620 | | | L | 0 | 0 | 3130 | 0 | +1 | |
| Chelsea < > Leeds United |
| VDQ | < | Charlie CRESSWELL | CB | ENG | 61 | 84 | 07/12/02 (22) | 82 | 1.87 | 74 | Leeds United | 6.50 | 11620 | | | | 0 | 0 | 2840 | 0 | +1 | (t.3, Chelsea) |
| Southampton < > 1,100,000 Leeds United |
| XIP | < | Patrick BAMFORD | St | ENG | 56 | 93 | 05/09/93 (32) | 92 | 1.84 | 70 | Southampton | 6.58 | 4520 | | | | 3 | 0 | 1125 | 4 | +1 | |
 Girona < > 8,620,000 Plymouth Argyle |
| ULP | < | Thibaut COURTOIS | Gk | BEL | 72 | 12 | 11/05/92 (33) | 90 | 1.93 | 79 | Girona | | | | | | | | 6205 | | | |
 Mladost Lucani 1,850,000 < > Bury |
| HZG | > | Nikola JOJIC | RW/AM | SRB | 52 | 80 | 15/09/03 (21) | 85 | | | Bury | | 2210 | | | | 0 | 0 | 1235 | 0 | +1 | |
| 400,000 < > Newcastle United |
| SMX | > | Ryan ONÉ | AM | SCO | 47 | 94 | 26/06/06 (19) | 93 | | | Newcastle United | | 660 | | | | 0 | 0 | 710 | 0 | Y | |
| 200,000 < > Newcastle United |
| YLZ | > | Joe JOHNSON | LB | ENG | 45 | 93 | 21/02/06 (19) | 93 | | | Newcastle United | | 460 | | | | 0 | 0 | 335 | 0 | Y | |
 Rennes 4,980,000 < > Brighton & HA |
| VWK | > | Adrien TRUFFERT | LWB | FRA | 64 | 78 | 20/11/01 (23) | 91 | 1.73 | 61 | Brighton & HA | | 16080 | | | | 0 | 0 | 3925 | 0 | +1 | |
| Harrogate Town 1,015,000 < > Crewe Alexandra |
| NZK | > | Jamie CUMMING | Gk | ENG | 54 | 78 | 04/09/99 (26) | 87 | 1.88 | 74 | Crewe Alexandra | | 2750 | | | | 0 | 0 | 790 | 0 | +1 | |
| 325,000 < > Scunthorpe United |
| CQI | > | Phil NEUMANN | CB | GER | 54 | 80 | 08/07/97 (28) | 87 | 1.87 | 76 | Scunthorpe United | | 3110 | | | | 0 | 0 | 595 | 0 | +1 | |
 FC Basel 5,600,000 < > Wycombe Wanderers |
| CHJ | > | Noah OKAFOR | St | SUI | 62 | 97 | 24/05/00 (25) | 91 | 1.85 | 85 | Wycombe Wanderers | | 10860 | | | | 0 | 0 | 4245 | 1 | +1 | |
| Loan/transfer listed |
| SMQ | - | Pape Matar SARR | CM | SEN | 64 | 99 | 14/09/02 (22) | 93 | 1.85 | 70 | Barnsley | 7.14 | 18080 | | | T | 1 | 0 | 6440 | 1 | +3 | |
| UVW | - | Amad DIALLO | RW | CIV | 63 | 95 | 11/07/02 (23) | 94 | 1.73 | 72 | Barnsley | 6.80 | 9170 | | | T | 0 | 0 | 5015 | 0 | +3 | |
| KHR | - | Elliot ANDERSON | CM/AM | ENG | 64 | 88 | 06/11/02 (22) | 93 | 1.75 | 63 | Barnsley | 6.75 | 10120 | | | T | 2 | 0 | 6440 | 7 | +3 | |
| JLA | - | Harvey ELLIOTT | CM/RM | ENG | 63 | 88 | 04/04/03 (22) | 94 | 1.70 | 67 | Barnsley | 6.79 | 16380 | | | T | 3 | 0 | 5580 | 0 | +3 | |
| HMX | - | Darwin Gabriel NÚÑEZ Ribeiro | St | URU | 66 | 90 | 24/06/99 (26) | 86 | 1.87 | 78 | Plymouth Argyle | 6.71 | 26420 | | | T | 2 | 0 | 7155 | 6 | +1 | |
| Released |
| IXF | 16 | EDERSON Santana de Moraes | Gk | BRA | 70 | 8 | 17/08/93 (32) | 93 | 1.89 | 85 | Fenerbahçe | | | | | | | | 5050 | | | |
| NIR | 16 | Gary GARDNER | CM | ENG | 47 | 14 | 26/06/92 (33) | 96 | 1.87 | 82 | Kickers Emden | | | | | | | | 40 | | | |
| XFV | 16 | Max THOMPSON | Gk | ENG | 44 | 13 | 01/08/04 (21) | 95 | | | Albion Rovers | | | | | | | | 260 | | | |
