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| Transfers |
 Doncaster Rovers 2,000,000 < > Oldham Athletic |
| PVA | > | Sheyi OJO | W | ENG | 55 | 99 | 19/06/97 (27) | 93 | 1.77 | 64 | Oldham Athletic | 6.20 | 3110 | | | | 3 | 0 | 1130 | 8 | +1 | |
| Middlesbrough 8,250,000 < > Manchester United |
| FUX | > | Anatoliy TRUBIN | Gk | UKR | 66 | 97 | 01/08/01 (23) | 90 | 1.99 | 86 | Manchester United | 6.88 | 28020 | | | | 1 | 0 | 5890 | 0 | +4 | |
| Colchester United 4,500,000 < > Manchester United |
| QMQ | > | Noussair MAZRAOUI | RB | MAR | 65 | 95 | 14/11/97 (27) | 90 | 1.78 | 63 | Manchester United | 6.75 | 23800 | | 1 | | 5 | 0 | 3395 | 0 | +3 | |
 SK Rapid Wien < > 870,000 Preston North End |
| AFE | < | Emanuel AIWU | CB | AUT | 55 | 15 | 25/12/00 (24) | 89 | 1.84 | 77 | SK Rapid Wien | | | | | | | | 920 | | | |
| SKN St.Pölten < > 290,000 Port Vale |
| IUJ | < | Justin OMOREGIE | CB | AUT | 46 | 5 | 21/09/03 (21) | 88 | 1.91 | 85 | SKN St.Pölten | | | | | | | | 310 | | | |
 Gil Vicente < > 2,920,000 Port Vale |
| LIC | < | KAIO César Andrade Lima | RW | BRA | 53/58 | 14 | 15/02/04 (21) | 72 | 1.68 | 64 | Gil Vicente | | | | | | | | 2985 | | | |
 RWDM47 < > 1,030,000 Notts County |
| JEE | < | Kyriani SABBE | RB | BEL | 56 | 2 | 21/01/05 (20) | 89 | | | RWDM47 | | | 4 | | | | | 1665 | | | |
| Brighton & HA < > 1,520,000 Notts County |
| TQF | < | AHMETCAN Kaplan | CB | TUR | 57 | 95 | 16/01/03 (22) | 91 | 1.89 | 75 | Brighton & HA | 7.12 | 5550 | | | | 0 | 1 | 1585 | 0 | +1 | |
| 1,700,000 < > Manchester City |
| WMU | > | Reggie WALSH | CM/DM | ENG | 36 | 99 | 20/10/08 (16) | 92 | | | Manchester City | | 130 | | | | 0 | 0 | 160 | 0 | Y | |
| Wolves 11,400,000 < > Tottenham Hotspur |
| VXI | > | Raphael Dias Belloli, RAPHINHA | W | BRA | 68 | 96 | 14/12/96 (28) | 89 | 1.76 | 67 | Tottenham Hotspur | 6.96 | 43140 | | | | 3 | 0 | 7200 | 5 | +1 | |
 Almería 300,000 < > Tottenham Hotspur |
| ABL | > | Harry GRAY | St | ENG | 37 | 97 | 08/10/08 (16) | 92 | | | Tottenham Hotspur | | 140 | | | | 0 | 0 | 240 | 0 | Y | |
| Sheffield United < > 2,590,000 Carlisle United |
| EBO | < | Kalvin PHILLIPS | CM | ENG | 62 | 95 | 02/12/95 (29) | 93 | 1.78 | 72 | Sheffield United | 6.39 | 11760 | | | | 2 | 0 | 2825 | 0 | +3 | |
| 1,300,000 < > Oldham Athletic |
| SXY | > | Finn AZAZ | AM | IRL | 58 | 96 | 07/09/00 (24) | 89 | 1.85 | 70 | Oldham Athletic | | 5510 | | | | 0 | 0 | 2140 | 0 | +1 | |
 Elfsborg 6,600,000 < > Watford |
| VPQ | > | Jacob ONDREJKA | St | SWE | 61 | 97 | 02/09/02 (22) | 89 | 1.74 | 70 | Watford | | 10120 | | | | 0 | 0 | 4875 | 0 | | |
| Loan/transfer listed |
| ELO | - | PAU LÓPEZ Sabata | Gk | ESP | 63 | 98 | 13/12/94 (30) | 90 | 1.89 | 77 | Sheffield Weds. | 6.73 | 27220 | | | T | 4 | 0 | 2135 | 0 | +4 | |
| Released |
| YYD | 16 | Harlee DEAN | CB | ENG | 47 | 4 | 26/07/91 (33) | 95 | 1.92 | 83 | Airdrieonians | | | | | | | | F/t | | | |
| LIY | 16 | Jack KINGDON | CB | SCO | 38 | 6 | 16/11/05 (19) | 93 | | | Manchester United | | | | | | | | 75 | | | |
| Loan callbacks |
| EXV | - | Mikayil Ngor FAYE | CB/LB | SEN | 58 | 86 | 14/07/04 (20) | 90 | | | Sheffield Weds. | | 6760 | | | L | 0 | 0 | 2225 | 0 | +3 | |
