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| Transfers |
 Go Ahead Eagles 7,000,000 < > Feyenoord |
| SZL | > | Jakob BREUM MARTINSEN | W | DEN | 62 | 89 | 17/11/03 (21) | 90 | 1.78 | 69 | Feyenoord | | 12160 | | | | 0 | 0 | 5325 | 0 | +2 | |
 Plymouth Argyle < > 2,650,000 Feyenoord |
| OEA | < | Ross McCAUSLAND | RW | NIR | 58 | 11 | 12/05/03 (22) | 89 | | | Plymouth Argyle | | | | | | | | 2705 | | | |
AaB < > 350,000  FC Schalke 04 |
| QPM | < | Andreas LINDE | Gk | SWE | 53/54 | 12 | 24/07/93 (32) | 78 | 1.96 | 93 | AaB | | | | | | | | 460 | | | |
 Lazio 9,000,000 < > FC Schalke 04 |
| RCE | > | Boubacar KAMARA | DM | FRA | 65 | 94 | 23/11/99 (25) | 80 | 1.78 | 68 | FC Schalke 04 | | 21700 | | | | 0 | 0 | 3815 | 0 | +4 | |
 Hapoel Beer Sheva < >  Club Brugge |
| SBC | < | Liel ABADA | RW | ISR | 62 | 95 | 03/10/01 (23) | 89 | 1.67 | 61 | Club Brugge | 6.96 | 11960 | | | | 1 | 0 | 4340 | 0 | +4 | (t.32, Hapoel Beer Sheva) |
 Shakhtar 14,250,000 < > Club Brugge |
| UYW | > | Ricardo PEPI | CS | USA | 62 | 79 | 09/01/03 (22) | 84 | 1.85 | 77 | Club Brugge | 6.50 | 12860 | | | | 0 | 0 | 5635 | 2 | +2 | |
| Guiseley < > Newcastle United |
| YNU | < | Tyrese HALL | CM/AM | ENG | 39 | 92 | 04/09/05 (19) | 89 | | | Newcastle United | | 190 | | | | 0 | 0 | 190 | 0 | Y | (t.7, Guiseley) |
| Runcorn < > Newcastle United |
| UEG | < | Kadan YOUNG | AM/CM | ENG | 41 | 93 | 19/01/06 (19) | 94 | | | Newcastle United | | 280 | | | | 0 | 0 | 275 | 0 | Y | (t.7, Runcorn) |
 Kairat 650,000 < > IFK Göteborg |
| UXC | > | Dastan SATPAEV | CS | KAZ | 39 | 97 | 12/08/08 (17) | 87 | 1.70 | 59 | IFK Göteborg | | 200 | | | | 0 | 0 | 300 | 0 | Y | |
 TP Mazembe < > IFK Göteborg |
| PMT | < | Simon ADINGRA | LW | CIV | 61/63 | 94 | 01/01/02 (23) | 77 | 1.75 | 68 | IFK Göteborg | | 5150 | | | | 0 | 0 | 5015 | 0 | +1 | (t.32, TP Mazembe) |
 Cascavel-PR < > Arsenal |
| YHT | < | LUIS GUILHERME Lira dos Santos | CM | BRA | 54/56 | 92 | 09/02/06 (19) | 76 | 1.75 | 65 | Arsenal | | 2110 | | | | 0 | 0 | 2665 | 0 | Y | (t.38, Cascavel-PR) |
 Santa Fé < > 670,000  Real Betis |
| NVY | < | Santiago ARIAS Naranjo | RB | COL | 61 | 12 | 13/01/92 (33) | 96 | 1.76 | 68 | Santa Fé | | | | | | | | 755 | | | |
 Urawa Reds 6,500,000 < > Real Betis |
| GNV | > | Zion SUZUKI | Gk | JPN | 63 | 88 | 21/08/02 (23) | 88 | 1.88 | 90 | Real Betis | | 13840 | | | | 0 | 0 | 3885 | 0 | +4 | |
| Padova 24,000,000 < > Real Betis |
| DVJ | > | Giovanni LEONI | CB | ITA | 60 | 77 | 21/12/06 (18) | 89 | 1.95 | 76 | Real Betis | | 4370 | | | | 0 | 0 | 3480 | 0 | Y | |
Cádiz < > 7,130,000  Benfica |
| NUJ | < | Oihan SANCET Tirapu | CM/AM | ESP | 66 | 1 | 25/04/00 (25) | 93 | 1.88 | 74 | Cádiz | | | | | | | | 6490 | | | |
| 1,200,000 < > Lyon |
| IIY | > | Jahmai SIMPSON-PUSEY | CB | ENG | 48 | 92 | 04/11/05 (19) | 86 | 1.87 | 79 | Lyon | | 710 | | | | 0 | 0 | 545 | 0 | Y | |
| B.Mönchengladbach 2,945,000 < > Borussia Dortmund |
| ZIL | > | Janis BLASWICH | Gk | GER | 65 | 86 | 02/05/91 (34) | 93 | 1.93 | 86 | Borussia Dortmund | | 23000 | | | | 0 | 0 | 2185 | 0 | +1 | |
| Fluminense 4,515,000 < > Atlético-MG |
| QCA | > | PEDRO Guilherme Abreu dos Santos | CS | BRA | 62 | 69 | 20/06/97 (28) | 92 | 1.85 | 78 | Atlético-MG | | 11860 | | | | 0 | 0 | 3530 | 0 | +1 | |
| Loan/transfer listed |
| QTT | - | Jonjoe KENNY | RB/CB | ENG | 59 | 94 | 15/03/97 (28) | 89 | 1.76 | 67 | FC Schalke 04 | 7.21 | 6530 | | | T | 0 | 0 | 1315 | 0 | | |
| LMU | - | Florian FLICK | CM | GER | 53 | 31 | 01/05/00 (25) | 87 | 1.90 | 80 | FC Schalke 04 | | 3200 | 7 | | T | 1 | 0 | 945 | 0 | | |
| QKI | - | Donis AVDIJAJ | LW | KOS | 54 | 92 | 25/08/96 (29) | 83 | 1.72 | 70 | FC Schalke 04 | | 3390 | | | T | 3 | 0 | 830 | 0 | | |
| LLC | - | Martin DÚBRAVKA | Gk | SVK | 62 | 93 | 15/01/89 (36) | 88 | 1.87 | 77 | Newcastle United | | 15440 | | | T | 3 | 0 | 995 | 0 | | |
| SIM | - | Mahamadou DIAWARA | CM | FRA | 53/54 | 93 | 17/02/05 (20) | 78 | | | Rangers | | 1760 | | | T | 0 | 0 | 1830 | 0 | Y | |
| SVF | - | Folarin BALOGUN | CS | USA | 62 | 93 | 03/06/01 (24) | 87 | 1.78 | 66 | Rangers | | 15740 | | | T | 0 | 0 | 4490 | 0 | +1 | |
| TIO | - | MATHEUS NASCIMENTO de Paula | CS | BRA | 49/52 | 94 | 03/03/04 (21) | 75 | 1.85 | 71 | Deportivo | | 2550 | | | T | 0 | 0 | 1440 | 0 | +2 | |
| VIM | - | YOUSSEF Ramalho CHERMITI | St | POR | 58 | 44 | 24/05/04 (21) | 85 | 1.92 | 81 | Deportivo | | 3410 | | | T | 0 | 0 | 3475 | 0 | Y | |
| HHM | - | Mohamed EL AROUCH | CM | FRA | 46 | 90 | 06/04/04 (21) | 82 | 1.66 | 56 | IFK Göteborg | | 570 | | | T | 0 | 0 | 490 | 0 | Y | |
| HJS | - | Kacper KOZLOWSKI | CM | POL | 59/60 | 95 | 16/10/03 (21) | 78 | 1.83 | 82 | IFK Göteborg | | 9280 | | | T | 0 | 0 | 3995 | 0 | | |
| SPF | - | Álvaro Daniel RODRÍGUEZ Muńoz | CS | URU | 54/55 | 95 | 14/07/04 (21) | 79 | 1.92 | 81 | Paris SG | | 2050 | | | T | 0 | 0 | 2240 | 0 | Y | |
| ODT | - | Aaron MALOUDA | W | FRA | 48 | 94 | 30/11/05 (19) | 87 | | | Paris SG | | 780 | | | T | 0 | 0 | 825 | 0 | Y | |
| Released |
| WKU | 16 | Kerim CALHANOGLU | LW/AM | GER | 48 | 8 | 26/08/02 (23) | 86 | 1.80 | 80 | Brighton & HA | | | | | | | | 525 | | | |
| SSF | 25+ | Matty WARHURST | CS | ENG | 37 | 13 | 25/09/06 (18) | 90 | | | Hendon | | | | | | | | 190 | | | |
| Loan callbacks |
| KKS | - | Jadon SANCHO | W | ENG | 60/64 | 44 | 25/03/00 (25) | 74 | 1.80 | 76 | Lazio | | 22100 | 3 | | | 1 | 0 | 4875 | 0 | | |
