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| Transfers |
 Peñarol < > 3,130,000  Norwich City |
| ZNL | < | Rodrigo Javier DE PAUL | CM/AM | ARG | 66 | 14 | 24/05/94 (31) | 95 | 1.78 | 78 | Peñarol | | | | | | | | 4355 | | | |
 Flamengo < > 6,580,000 Norwich City |
| HMX | < | Darwin Gabriel NÚÑEZ Ribeiro | St | URU | 66 | 12 | 24/06/99 (26) | 91 | 1.87 | 78 | Flamengo | | | | | | | | 7155 | | | |
| Swansea City 30,000,000 < > Morecambe |
| HBR | > | Marco ASENSIO Willemsen | AM/W | ESP | 66 | 43 | 21/01/96 (29) | 89 | 1.78 | 70 | Morecambe | | 25720 | 7 | | | 1 | 0 | 5060 | 0 | +2 | |
| YEC | > | Saël KUMBEDI Nseke | RB | FRA | 60/61 | 95 | 26/03/05 (20) | 79 | 1.75 | 63 | Morecambe | | 10020 | | | | 0 | 0 | 3425 | 0 | +2 | |
| Swansea City < > 22,500,000 Morecambe |
| DVJ | < | Giovanni LEONI | CB | ITA | 60 | 89 | 21/12/06 (18) | 81 | 1.95 | 76 | Swansea City | 6.00 | 4590 | | | | 0 | 0 | 3480 | 0 | Y | |
 Atlético < > Exeter City |
| LLV | < | LUÍS Hemir Silva SEMEDO | CS | POR | 53 | 92 | 11/08/03 (22) | 88 | | | Exeter City | | 2890 | | | | 0 | 0 | 1505 | 0 | | (t.3, Atlético) |
| Lille < > 1,080,000 Exeter City |
| LLM | < | RICARDO de Sousa ESGAIO | RWB | POR | 61 | 11 | 16/05/93 (32) | 90 | 1.71 | 66 | Lille | | | | | | | | 1085 | | | |
| Lorient < > 3,690,000 Hull City |
| CHJ | < | Noah OKAFOR | St | SUI | 61/62 | 4 | 24/05/00 (25) | 79 | 1.85 | 85 | Lorient | | | | | | | | 4245 | | | |
 Pogon Szczecin < > 440,000 Hull City |
| TBN | < | Dariusz STALMACH | AM/CM | POL | 46 | 9 | 08/12/05 (19) | 83 | 1.82 | 75 | Pogon Szczecin | | | | | | | | 610 | | | |
 Hertha BSC Berlin 9,250,000 < > Hull City |
| IBY | > | Bence DARDAI | CM/AM | GER | 61 | 87 | 24/01/06 (19) | 88 | 1.88 | 71 | Hull City | | 5550 | | | | 0 | 0 | 5480 | 0 | Y | |
 Nashville < > 570,000 Crystal Palace |
| MBB | < | Jahkeele MARSHALL-RUTTY | St | CAN | 47 | 14 | 16/06/04 (21) | 84 | 1.68 | 61 | Nashville | | | | | | | | 680 | | | |
| Nantwich Town < > 520,000 Crystal Palace |
| FPO | < | Dujuan RICHARDS | CS | JAM | 43 | 2 | 10/11/05 (19) | 86 | | | Nantwich Town | | | | | | | | 455 | | | |
| Servette < > 1,470,000 Leicester City |
| DHF | < | Kamal Deen SOWAH | AM | GHA | 56 | 14 | 09/01/00 (25) | 86 | 1.79 | 66 | Servette | | | | | | | | 1500 | | | |
| Wigan Athletic 14,100,000 < > Bolton Wanderers |
| XMD | > | Jobe BELLINGHAM | CM/AM | ENG | 61 | 40 | 23/09/05 (19) | 92 | 1.87 | 73 | Bolton Wanderers | 7.81 | 10720 | 22 | | | 2 | 0 | 5480 | 0 | +3 | |
 Ajax 3,635,000 < > Wrexham |
| GKU | > | Aaron BOUWMAN | CB | NED | 43 | 81 | 25/08/07 (18) | 87 | | | Wrexham | | 360 | | | | 0 | 0 | 265 | 0 | Y | |
| Jong Ajax 3,635,000 < > Wrexham |
| JAN | > | Sean STEUR | CM | NED | 49 | 93 | 11/01/08 (17) | 89 | | | Wrexham | | 950 | | | | 0 | 0 | 1135 | 0 | Y | |
 Union SG 8,015,000 < > Everton |
| VLE | > | Anan KHALAILI | W | ISR | 62 | 78 | 03/09/04 (21) | 91 | 1.83 | 77 | Everton | | 12760 | | | | 0 | 0 | 5325 | 0 | +2 | |
| Arouca 8,815,000 < > Everton |
| NGP | > | ASSANE DIAO Diaoune | W | SEN | 62 | 85 | 07/09/05 (20) | 88 | 1.85 | 80 | Everton | | 10260 | | | | 0 | 0 | 5825 | 0 | +2 | |
| KV Mechelen 6,015,000 < > Everton |
| KZN | > | Ngal'ayel MUKAU | DM | COD | 61 | 96 | 03/11/04 (20) | 86 | 1.88 | 70 | Everton | | 10020 | | | | 0 | 0 | 3425 | 0 | +2 | |
| FER | > | Moncef ZEKRI | LB | MAR | 43 | 96 | 20/09/08 (16) | 86 | 1.71 | 68 | Everton | | 300 | | | | 0 | 0 | 325 | 0 | Y | |
| Northampton Town < > 30,000,000 Swansea City |
| QGD | < | Facundo Valentín BUONANOTTE | AM/W | ARG | 62 | 94 | 23/12/04 (20) | 86 | 1.74 | 66 | Northampton Town | | 12860 | | | | 0 | 0 | 5825 | 0 | +1 | |
| Heracles Almelo 4,000,000 < > Swindon Town |
| FYE | > | Sepp VAN DEN BERG | CB | NED | 64 | 88 | 20/12/01 (23) | 91 | 1.90 | 78 | Swindon Town | | 19180 | | | | 0 | 0 | 3925 | 0 | +4 | |
| UXU | < | Carney CHUKWUEMEKA | CM | ENG | 55 | 10 | 20/10/03 (21) | 94 | 1.82 | 70 | Heracles Almelo | | | | | | | | 1925 | | | |
| Clermont < > 1,600,000 Northampton Town |
| BXS | < | Cheick Oumar DOUCOURÉ | DM | MLI | 61 | 5 | 08/01/00 (25) | 90 | 1.80 | 73 | Clermont | | | | | | | | 2145 | | | |
| Tranmere Rovers 1,750,000 < > Northampton Town |
| NAM | > | Louie BARRY | St | ENG | 52 | 96 | 21/06/03 (22) | 94 | | | Northampton Town | 5.87 | 2420 | | | | 0 | 0 | 1295 | 0 | +4 | |
 Sydney FC < > 5,600,000 Crewe Alexandra |
| RNR | < | GERSON Santos da Silva | CM/AM | BRA | 64 | 15 | 20/05/97 (28) | 83 | | | Sydney FC | | | | | | | | 4060 | | | |
| 822,000 < > Peterborough Utd |
| DKH | > | Reda LAALAOUI | AM/RW | MAR | 52 | 84 | 11/05/05 (20) | 95 | | | Peterborough Utd | | 2200 | | | | 0 | 0 | 1365 | 0 | | |
| 710,000 < > Peterborough Utd |
| CTS | > | Liam GIBBS | AM | ENG | 52 | 98 | 16/12/02 (22) | 95 | | | Peterborough Utd | | 2480 | | | | 0 | 0 | 1110 | 0 | | |
| 1,500,000 < > Stoke City |
| KJX | < | BAE Jun-ho | AM/LW | KOR | 57 | 97 | 21/08/03 (22) | 85 | 1.80 | 72 | Stoke City | | 5560 | | | | 0 | 0 | 2335 | 0 | | |
 FC Salzburg 2,260,000 < > Rochdale |
| TGE | > | Bashir HUMPHREYS | CB/DM | ENG | 58 | 86 | 15/03/03 (22) | 84 | 1.86 | 79 | Rochdale | | 5410 | | | | 0 | 0 | 1840 | 0 | +1 | |
 ZESCO United 3,345,000 < > Peterborough Utd |
| SAH | > | Patson DAKA | CS | ZAM | 59 | 96 | 09/10/98 (26) | 86 | 1.85 | 75 | Peterborough Utd | | 6700 | | | | 0 | 0 | 2575 | 0 | +1 | |
| Loan/transfer listed |
| VUJ | - | Álvaro ODRIOZOLA Arzallus | RB | ESP | 59 | 90 | 14/12/95 (29) | 92 | 1.78 | 74 | Exeter City | | 10420 | | | T | 0 | 0 | 1225 | 0 | | |
| IHZ | - | Sam JOHNSTONE | Gk | ENG | 61 | 94 | 25/03/93 (32) | 94 | 1.82 | 80 | Exeter City | | 9520 | | | T | 1 | 0 | 1405 | 0 | +1 | |
| XJB | - | Max JOHNSTON | RB | SCO | 56 | 94 | 24/12/03 (21) | 86 | 1.85 | 83 | Port Vale | | 1930 | | | T | 3 | 0 | 1515 | 0 | +3 | |
| KXT | - | Makenzie KIRK | CS | NIR | 50 | 94 | 06/02/04 (21) | 88 | | | Bradford City | | 1570 | | | T | 0 | 0 | 1070 | 0 | | |
| TPU | - | Rory MacLEOD | CS | SCO | 39 | 95 | 03/02/06 (19) | 89 | 1.72 | 65 | Bradford City | | 180 | | | T | 0 | 0 | 235 | 0 | Y | |
| TVC | - | Alfie BAVIDGE | CS | SCO | 44 | 94 | 11/04/06 (19) | 83 | | | Bradford City | | 350 | | | T | 0 | 0 | 530 | 0 | Y | |
| Released |
| YUY | 16 | Shayden MORRIS | W | ENG | 49 | 2 | 03/11/01 (23) | 93 | 1.83 | 68 | Luton Town | | | 4 | | | | | 615 | | | |
| TXK | <20 | Josh STOKES | AM | ENG | 48 | 1 | 30/04/04 (21) | 89 | | | Romorantin | | | | | | | | 675 | | | |
