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| Transfers |
 Charlton Athletic < > FC Halifax Town |
| URY | < | Lucas HŘGSBERG | CB | DEN | 55 | 96 | 23/06/06 (19) | 84 | | | FC Halifax Town | | 2320 | | | | 0 | 0 | 1570 | 0 | Y | (t.35, Charlton Athletic) |
| LYE | < | Sindre EGELI | CS | NOR | 55/56 | 89 | 21/06/06 (19) | 78 | | | FC Halifax Town | | 2580 | | | | 0 | 0 | 3105 | 0 | Y | (t.35, Charlton Athletic) |
| Accrington Stan. 20,000,000 < > Bolton Wanderers |
| EUQ | > | Sverre Halseth NYPAN | CM | NOR | 59/60 | 94 | 19/12/06 (18) | 79 | | | Bolton Wanderers | | 4360 | | | | 0 | 0 | 5130 | 0 | Y | |
| AEX | < | Becir OMERAGIC | CB | SUI | 61 | 44 | 20/01/02 (23) | 88 | 1.87 | 76 | Accrington Stan. | | 10220 | 1 | | | 3 | 0 | 2555 | 0 | | |
 Anorthosis 1,250,000 < > Port Vale |
| BTF | > | Evagoras CHARALAMBOUS | CS | CYP | 48 | 94 | 27/06/05 (20) | 89 | | | Port Vale | | 680 | | | | 0 | 0 | 880 | 0 | Y | |
| Rotherham United 2,600,000 < > Northampton Town |
| LXW | > | Jacob GREAVES | CB | ENG | 60 | 97 | 12/09/00 (24) | 92 | 1.85 | 70 | Northampton Town | 6.83 | 8630 | | | | 1 | 2 | 1955 | 0 | +4 | |
| Rotherham United 2,700,000 < > Northampton Town |
| FSE | > | Dara O'SHEA | CB/RB | IRL | 61 | 96 | 04/03/99 (26) | 91 | 1.89 | 76 | Northampton Town | 7.50 | 9500 | | | | 2 | 0 | 2020 | 0 | +4 | |
 Dundee United 250,000 < > Bradford City |
| CFD | > | Samuel HARDING | CB | SCO | 43 | 65 | 10/07/03 (22) | 89 | | | Bradford City | | 600 | | | | 0 | 0 | 145 | 0 | +4 | |
| Morton 360,000 < > Bradford City |
| ATD | > | Sam MURDOCH | Gk | SCO | 42 | 96 | 19/07/07 (17) | 86 | | | Bradford City | | 260 | | | | 0 | 0 | 265 | 0 | Y | |
| Dundee United 800,000 < > Bradford City |
| AUQ | > | Owen STIRTON | CS | SCO | 44 | 88 | 30/01/07 (18) | 98 | | | Bradford City | | 320 | | | | 0 | 0 | 585 | 0 | Y | |
| 375,000 < > Sheffield United |
| CME | < | Jevan BEATTIE | St | SCO | 39 | 84 | 20/12/06 (18) | 95 | | | Sheffield United | | 180 | | | | 0 | 0 | 270 | 0 | Y | |
| Hamilton 250,000 < > Cheltenham Town |
| AGI | > | Josh LANE | Gk | SCO | 41 | 97 | 22/06/06 (19) | 85 | | | Cheltenham Town | | 220 | | | | 0 | 0 | 180 | 0 | Y | |
| Ross County 350,000 < > Cheltenham Town |
| PLU | > | Andrew MacLEOD | CM | SCO | 41 | 97 | 31/01/05 (20) | 91 | | | Cheltenham Town | | 210 | | | | 0 | 0 | 240 | 0 | Y | |
 Nashville < > 2,570,000 Morecambe |
| KFJ | < | Ruben LOFTUS-CHEEK | CM | ENG | 63 | 11 | 23/01/96 (29) | 94 | 1.93 | 72 | Nashville | | | | | | | | 3275 | | | |
| 60,000 < > Morecambe |
| BCF | > | George FINNEY | RB | ENG | 39 | 86 | 16/05/07 (18) | 93 | | | Morecambe | | 190 | | | | 0 | 0 | 120 | 0 | Y | |
| Tranmere Rovers < > Wrexham |
| MIY | < | ARNAU MARTÍNEZ López | RB/CB | ESP | 63 | 95 | 25/04/03 (22) | 89 | 1.82 | 72 | Wrexham | | 15940 | | | | 0 | 0 | 3780 | 0 | +2 | (t.35, Tranmere Rovers) |
| KJE | < | Iván FRESNEDA Corraliza | RB | ESP | 61 | 95 | 28/09/04 (20) | 85 | 1.82 | 77 | Wrexham | | 8430 | | | | 0 | 0 | 3425 | 0 | +3 | (t.35, Tranmere Rovers) |
| Burnley < > Wrexham |
| TGG | < | Jeanuël BELOCIAN | CB | FRA | 59 | 96 | 17/02/05 (20) | 80 | 1.86 | 73 | Wrexham | | 9060 | | | | 1 | 0 | 2570 | 0 | +3 | (t.35, Burnley) |
| VTJ | < | Valentin ATANGANA EDOA | DM | FRA | 61 | 56 | 25/08/05 (19) | 86 | | | Wrexham | | 11420 | | | | 0 | 0 | 3715 | 0 | +5 | (t.35, Burnley) |
| Brřndby 4,500,000 < > Manchester United |
| UUZ | > | Clement BISCHOFF | LW | DEN | 56 | 85 | 16/12/05 (19) | 86 | 1.80 | 76 | Manchester United | | 2450 | | | | 0 | 0 | 2665 | 0 | Y | |
| Bristol City < > Liverpool |
| THS | < | MARCOS LEONARDO Santos Almeida | St | BRA | 63 | 93 | 02/05/03 (22) | 81 | 1.78 | 71 | Liverpool | | 15440 | | | | 0 | 0 | 6510 | 0 | +1 | (t.35, Bristol City) |
| IFS | < | Malik TILLMAN | AM/LW | USA | 64 | 95 | 28/05/02 (23) | 85 | 1.87 | 71 | Liverpool | | 17680 | | | | 1 | 0 | 5790 | 0 | +1 | (t.35, Bristol City) |
| Middlesbrough < > Liverpool |
| KVG | < | Wesley FOFANA | CB | FRA | 63 | 91 | 17/12/00 (24) | 88 | 1.90 | 76 | Liverpool | | 14940 | | | | 3 | 0 | 3025 | 0 | +1 | (t.35, Middlesbrough) |
| LNG | < | Yehor YARMOLYUK | CM | UKR | 62 | 95 | 01/03/04 (21) | 84 | 1.76 | 65 | Liverpool | | 10220 | | | | 0 | 0 | 5325 | 0 | | (t.35, Middlesbrough) |
| Aston Villa < > Liverpool |
| IMJ | < | CAN Uzun | LW/AM | TUR | 60 | 94 | 11/11/05 (19) | 81 | 1.86 | 67 | Liverpool | | 5240 | | | | 0 | 0 | 4750 | 0 | Y | (t.35, Aston Villa) |
| FSL | < | George ILENIKHENA | CS | FRA | 61 | 82 | 16/08/06 (18) | 91 | 1.85 | 76 | Liverpool | | 5100 | | | | 0 | 0 | 6910 | 0 | Y | (t.35, Aston Villa) |
 AZ < > 3,270,000 Cambridge United |
| LHE | < | NUNO Albertino Varela TAVARES | LB/LM | POR | 61/63 | 0 | 26/01/00 (25) | 77 | 1.83 | 75 | AZ | | | | | | | | 2865 | | | |
| Ipswich Town < > Cambridge United |
| MHG | < | Paxten AARONSON | AM | USA | 62 | 99 | 23/08/03 (21) | 80 | 1.75 | 63 | Cambridge United | | 12560 | | | | 0 | 0 | 5325 | 0 | +1 | (t.35, Ipswich Town) |
| RHF | < | DIEGO Manuel Jadon da Silva MOREIRA | LWB/LM | POR | 60/62 | 91 | 06/08/04 (20) | 76 | 1.79 | 73 | Cambridge United | | 5010 | | | | 0 | 0 | 3945 | 0 | Y | (t.35, Ipswich Town) |
 LKS Lódz < > 3,380,000 Macclesfield FC |
| JVO | < | Jakub KAMINSKI | LW | POL | 60/62 | 1 | 05/06/02 (23) | 77 | 1.79 | 68 | LKS Lódz | | | | | | | | 4340 | | | |
| Barcelona Atlčtic 75,000 < > Macclesfield FC |
| SHN | > | Áron YAAKOBISHVILI | Gk | HUN | 36 | 86 | 06/03/06 (19) | 89 | | | Macclesfield FC | | 130 | | | | 0 | 0 | 50 | 0 | Y | |
 Bnei Sakhnin < > 5,430,000 Cardiff City |
| BCB | < | Ernest NUAMAH | W | GHA | 62 | 10 | 01/11/03 (21) | 94 | | | Bnei Sakhnin | | | | | | | | 5325 | | | |
 Fiorentina 2,200,000 < > Nottingham Forest |
| SGG | > | EMERSON Aparecido Leite de Souza Junior | RWB | BRA | 63 | 77 | 14/01/99 (26) | 86 | 1.81 | 79 | Nottingham Forest | | 15440 | | | | 0 | 0 | 2705 | 0 | +4 | |
| RCI | < | Marcos SENESI | CB | ARG | 63 | 12 | 10/05/97 (28) | 93 | 1.84 | 80 | Fiorentina | | | | | | | | 2385 | | | |
| Derby County 2,750,000 < > Nottingham Forest |
| XVJ | > | Francisco EVANILSON de Lima Barbosa | St | BRA | 64 | 97 | 06/10/99 (25) | 92 | 1.80 | 80 | Nottingham Forest | 6.88 | 17380 | | | | 2 | 0 | 5680 | 0 | +4 | |
| XCI | < | Jonas Older WIND | St | DEN | 64 | 94 | 07/02/99 (26) | 90 | 1.86 | 76 | Derby County | | 17280 | | | | 3 | 0 | 5360 | 0 | | |
 Borussia Dortmund 3,750,000 < > Nottingham Forest |
| LPD | > | Ansgar KNAUFF | RW | GER | 63 | 81 | 10/01/02 (23) | 86 | 1.80 | 73 | Nottingham Forest | | 15040 | | | | 0 | 0 | 5015 | 0 | +4 | |
| KQK | < | Calvin STENGS | AM/RW | NED | 62 | 13 | 18/12/98 (26) | 83 | 1.87 | 68 | Borussia Dortmund | | | | | | | | 3440 | | | |
| Released |
| HHM | 25+ | Mohamed EL AROUCH | CM | FRA | 46 | 4 | 06/04/04 (21) | 82 | 1.66 | 56 | Daring Brussels | | | | | | | | 490 | | | |
