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| Transfers |
 Espanyol 3,500,000 < >  Brentford |
| XQE | > | Aritz ELUSTONDO Irribarria | RB/CB | ESP | 64 | 97 | 11/01/94 (29) | 87 | 1.83 | 78 | Brentford | | 19180 | | | | 0 | 0 | 2575 | 0 | +1 | |
| Scunthorpe United 1,000,000 < > Brentford |
| MAQ | > | Jesús NAVAS González | RWB/RW | ESP | 64 | 94 | 21/11/85 (37) | 88 | 1.70 | 60 | Brentford | | 18680 | | | | 0 | 0 | F/t | 7 | +1 | |
| Bolton Wanderers 3,000,000 < > Accrington Stan. |
| LGO | > | Hannibal MEJBRI | LW/AM | TUN | 55 | 93 | 21/01/03 (20) | 80 | 1.84 | 70 | Accrington Stan. | | 1890 | | | | 0 | 0 | 2115 | 0 | Y | |
| Unión Adarve 5,000,000 < > Leeds United |
| UDC | > | Juan MIRANDA González | LB | ESP | 62 | 86 | 19/01/00 (23) | 86 | 1.85 | 74 | Leeds United | | 13460 | | | | 0 | 0 | 2950 | 0 | +4 | |
| XCI | < | Jonas Older WIND | AM/CS | DEN | 62 | 10 | 07/02/99 (24) | 89 | 1.86 | 76 | Unión Adarve | | | | | | | | 3855 | | | |
| Liverpool 21,000,000 < > Shrewsbury Town | Out of contract |
| PKE | > | Elye WAHI | St | FRA | 63 | 95 | 02/01/03 (20) | 88 | 1.78 | 70 | Shrewsbury Town | | 7240 | | | | 0 | 0 | 7850 | 8 | Y | |
| MK Dons < > Forest Green |
| LCC | < | Mykhailo MUDRYK | W/AM | UKR | 62 | 92 | 05/01/01 (22) | 93 | 1.75 | 61 | Forest Green | | 4150 | | | | 0 | 0 | 4830 | 11 | +2 | (t.30, MK Dons) |
| Bury 4,500,000 < > MK Dons |
| DEC | > | Kurt ZOUMA | CB | FRA | 64 | 94 | 27/10/94 (28) | 89 | 1.90 | 96 | MK Dons | | 17680 | | | | 0 | 0 | 2760 | 1 | +3 | |
| Aston Villa 11,800,000 < > Bristol Rovers |
| MSE | > | PEDRO Lomba NETO | LW/WS | POR | 62 | 95 | 09/03/00 (23) | 90 | 1.72 | 66 | Bristol Rovers | | 11760 | | | | 0 | 0 | 4340 | 28 | +4 | |
| QJK | < | Danny INGS | St | ENG | 63 | 99 | 23/07/92 (30) | 93 | 1.77 | 72 | Aston Villa | | 14140 | | | | 3 | 0 | 3540 | 30 | | |
 FC Salzburg 5,100,000 < > Bristol Rovers |
| XDY | > | Philipp KÖHN | Gk | SUI | 62 | 93 | 02/04/98 (25) | 91 | 1.91 | 75 | Bristol Rovers | | 12160 | | | | 0 | 0 | 2850 | 0 | +4 | |
| Barcelona Atlčtic 155,000 < > Wrexham |
| FXF | > | PAU PRIM Coma | DM | ESP | 37 | 96 | 22/02/06 (17) | 85 | | | Wrexham | | 150 | | | | 0 | 0 | 85 | 0 | Y | |
| FC Křbenhavn 3,000,000 < > FC Halifax |
| YJH | > | Elias JELERT | RB | DEN | 51 | 88 | 12/06/03 (20) | 88 | 1.70 | 62 | FC Halifax | | 1180 | | | | 0 | 0 | 790 | 0 | Y | |
| ETD | > | William CLEM | CM/CB | DEN | 48 | 78 | 20/06/04 (19) | 92 | | | FC Halifax | | 710 | | | | 0 | 0 | 825 | 0 | Y | |
 Brommapojkarna 535,000 < > FC Halifax |
| DRW | > | Filip SIDKLEV | Gk | SWE | 43 | 87 | 12/03/05 (18) | 89 | | | FC Halifax | | 360 | | | | 0 | 0 | 290 | 0 | Y | |
| Sunderland 5,000,000 < > QPR |
| FXV | > | Marius WOLF | RW/RWB | GER | 63 | 97 | 27/05/95 (28) | 87 | 1.87 | 73 | QPR | | 13840 | | | | 3 | 0 | 3510 | 0 | +2 | |
 Motherwell 325,000 < > Bradford City |
| EZH | > | Lennon MILLER | CM | SCO | 37 | 82 | 25/08/06 (16) | 88 | | | Bradford City | | 280 | | | | 0 | 0 | 195 | 0 | +4 | |
| Ross County 550,000 < > Forest Green |
| BPW | > | Dylan SMITH | CB | SCO | 45 | 82 | 21/06/06 (17) | 91 | | | Forest Green | | 440 | | | | 0 | 0 | 410 | 0 | Y | |
| Bury 1,250,000 < > Accrington Stan. | Out of contract |
| FTS | > | Karl HEIN | Gk | EST | 52 | 98 | 13/04/02 (21) | 86 | | | Accrington Stan. | | 2590 | | | | 0 | 0 | 930 | 0 | +4 | |
 Verona 1,025,000 < > Nottingham Forest |
| EQT | > | Filippo TERRACCIANO | CM | ITA | 48 | 84 | 08/02/03 (20) | 85 | | | Nottingham Forest | | 700 | | | | 0 | 0 | 750 | 0 | Y | |
| West Ham United 250,000 < > Nottingham Forest |
| LFC | > | Freddie POTTS | CM | ENG | 38 | 95 | 12/09/03 (19) | 98 | | | Nottingham Forest | | 170 | | | | 3 | 0 | 155 | 0 | Y | |
| Inter 575,000 < > Nottingham Forest |
| YED | > | Franco Ezequiel CARBONI | LB | ARG | 47 | 76 | 04/04/03 (20) | 90 | | | Nottingham Forest | | 550 | | | | 0 | 0 | 420 | 0 | Y | |
| Clermont < > 2,760,000 Blackpool |
| QXS | < | Bartlomiej DRAGOWSKI | Gk | POL | 62 | 15 | 19/08/97 (25) | 83 | 1.91 | 74 | Clermont | | | | | | | | 2850 | | | |
 Brasiliense < > 2,770,000 Crystal Palace |
| RAS | < | LUIS HENRIQUE Tomaz de Lima | LW | BRA | 56/58 | 10 | 14/12/01 (21) | 76 | | | Brasiliense | | | | | | | | 2985 | | | |
| Newcastle United 6,000,000 < > Arsenal |
| ORF | > | Elseid HYSAJ | WB | ALB | 64 | 94 | 02/02/94 (29) | 87 | 1.82 | 70 | Arsenal | | 16780 | | | | 2 | 0 | 2575 | 10 | +2 | |
| BQL | < | Jesús Manuel CORONA Ruíz | RW/RWB | MEX | 63 | 94 | 06/01/93 (30) | 87 | 1.73 | 68 | Newcastle United | | 15540 | | | | 2 | 0 | 3040 | 0 | | |
| Loan/transfer listed |
| XVR | - | Luca KILIAN | CB/DM | GER | 62 | 98 | 01/09/99 (23) | 90 | 1.92 | 91 | Notts County | | 10920 | | | T | 0 | 0 | 2950 | 6 | +2 | |
| VXS | - | Leo HJELDE | CB | NOR | 48/53 | 95 | 26/08/03 (19) | 71 | | | FC Halifax | | 1720 | | | T | 0 | 0 | 1170 | 0 | Y | |
| THA | - | Jesper TOLINSSON | CB | SWE | 45 | 94 | 28/02/03 (20) | 84 | | | FC Halifax | | 440 | | | T | 0 | 0 | 295 | 0 | Y | |
| AJY | - | Bryan Solhaug FIABEMA | St | NOR | 45 | 91 | 16/02/03 (20) | 82 | | | FC Halifax | | 420 | | | T | 0 | 0 | 560 | 0 | Y | |
| QRL | - | Elijah ADEBAYO | CS | ENG | 59 | 95 | 07/01/98 (25) | 97 | 1.93 | 89 | Northampton Town | | 4650 | | | T | 1 | 0 | 2730 | 0 | +1 | |
| QRL | - | Elijah ADEBAYO | CS | ENG | 59 | 95 | 07/01/98 (25) | 97 | 1.93 | 89 | Northampton Town | | 4650 | | | T | 1 | 0 | 2730 | 0 | +1 | |
| HCU | - | Lorenzo PIROLA | CB | ITA | 62 | 98 | 20/02/02 (21) | 84 | 1.86 | 72 | Blackpool | | 7700 | | | T | 0 | 0 | 3610 | 0 | | |
| TLD | - | Mohammed IHATTAREN | AM/RW | NED | 56 | 92 | 12/02/02 (21) | 81 | | | Blackpool | | 7130 | | | T | 0 | 0 | 2230 | 0 | +1 | |
| Released |
| PHF | 25+ | Jonny EVANS | CB | NIR | 61 | 13 | 03/01/88 (35) | 98 | 1.87 | 77 | América | | | | | | | | 125 | | | |
| UMP | 16 | Ajani BURCHALL | W | ENG | 38 | 1 | 05/11/04 (18) | 88 | | | Sora | | | | | | | | 180 | | | |
| GPC | 16 | Leonardo Yassir ZABALA Zeballos | CB | BOL | 44 | 15 | 23/05/03 (20) | 81 | | | Santos | | | | | | | | 250 | | | |
| WKI | 16 | Roman BÜRKI | Gk | SUI | 58 | 0 | 14/11/90 (32) | 90 | 1.87 | 85 | St. Louis CITY SC | | | | | | | | 885 | | | |
| YBV | 16 | Allan McGREGOR | Gk | SCO | 62 | 13 | 31/01/82 (41) | 94 | 1.83 | 74 | Valladolid | | | | | | | | F/t | | | |
| QDE | 16 | Aleksander BUKSA | St | POL | 48 | 12 | 15/01/03 (20) | 88 | 1.87 | 74 | WSG Tirol | | | | | | | | 880 | | | |
| UBC | 16 | Justin CHE | RB | USA | 50 | 10 | 18/11/03 (19) | 86 | 1.85 | 75 | TSG Hoffenheim | | | | | | | | 745 | | | |
| GKJ | 16 | Richie LEDEZMA | AM/LW | USA | 54 | 13 | 06/09/00 (22) | 83 | 1.73 | 70 | New York City | | | | | | | | 1500 | | | |
| Loan callbacks |
| NKP | - | Antonee ROBINSON | LB | USA | 63 | 95 | 08/08/97 (25) | 93 | 1.83 | 73 | Northampton Town | | 8530 | | | | 3 | 0 | 2865 | 2 | +1 | |
