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| Transfers |
 Turnhout < > 1,260,000  Crystal Palace |
| BFC | < | Pierre DWOMOH | CM | BEL | 54 | 0 | 21/06/04 (21) | 85 | 1.85 | 69 | Turnhout | | | | | | | | 1660 | | | |
 Krylia Sovetov < > Barnsley |
| HNQ | < | Daniil KHUDYAKOV | Gk | RUS | 55 | 85 | 09/01/04 (21) | 90 | 1.94 | 85 | Barnsley | | 4140 | | | | 0 | 0 | 1445 | 0 | | (t.42, Krylia Sovetov) |
| Fulham 2,850,000 < > Barnsley |
| HEQ | > | Jay STANSFIELD | CS | ENG | 55 | 94 | 24/11/02 (22) | 84 | | | Barnsley | | 4500 | | | | 0 | 0 | 2025 | 0 | +2 | |
| Swindon Town < > 12,500,000 (+10,000,000) Norwich City |
| FVB | < | James McATEE | RW/AM | ENG | 61 | 54 | 18/10/02 (22) | 89 | 1.80 | 72 | Swindon Town | | 10320 | 2 | | | 3 | 0 | 4180 | 0 | +4 | |
 Charlotte FC < > 780,000 Leicester City |
| OWD | < | Serge AURIER | RWB | CIV | 59 | 1 | 24/12/92 (32) | 88 | 1.74 | 75 | Charlotte FC | | | | | | | | 790 | | | |
| 95,000 < > Macclesfield FC |
| HEE | > | Ashton MISSIN | LW | ENG | 39 | 97 | 15/08/06 (19) | 88 | | | Macclesfield FC | | 190 | | | | 0 | 0 | 190 | 0 | Y | |
| 40,000 < > Macclesfield FC |
| GDN | > | Wellity LUCKY | CB/RB | ESP | 37 | 75 | 12/01/06 (19) | 92 | | | Macclesfield FC | | 150 | | | | 0 | 0 | 55 | 0 | Y | |
| 995,000 < > Macclesfield FC |
| HPG | > | Oluwaseun ADEWUMI | AM | AUT | 54 | 98 | 23/02/05 (20) | 86 | | | Macclesfield FC | | 1620 | | | | 0 | 0 | 1830 | 0 | Y | |
| 145,000 < > Nottingham Forest |
| UXG | > | Asher AGBINONE | W | ENG | 42 | 67 | 28/09/05 (19) | 92 | | | Nottingham Forest | | 290 | | | | 0 | 0 | 325 | 0 | Y | |
| 140,000 < > Nottingham Forest |
| QEA | > | Miodrag PIVAS | CB/DM | SRB | 45 | 96 | 17/05/05 (20) | 94 | 1.88 | 70 | Nottingham Forest | | 410 | | | | 0 | 0 | 295 | 0 | Y | |
| 160,000 < > Nottingham Forest |
| FPX | > | Chris ATHERTON | RW | NIR | 41 | 78 | 14/10/08 (16) | 91 | | | Nottingham Forest | | 250 | | | | 0 | 0 | 375 | 0 | Y | |
 Urawa Reds 4,750,000 < > Cardiff City |
| GNV | > | Zion SUZUKI | Gk | JPN | 63 | 97 | 21/08/02 (23) | 90 | 1.88 | 90 | Cardiff City | | 13840 | | | | 0 | 0 | 3885 | 0 | +4 | |
| ZGJ | < | Alex PALMER | Gk | ENG | 58 | 15 | 10/08/96 (29) | 84 | 1.83 | 72 | Urawa Reds | | | | | | | | 1080 | | | |
 River Plate 3,550,000 < > Liverpool |
| FCX | > | Juan Cruz MEZA | CM | ARG | 45 | 89 | 14/03/08 (17) | 89 | | | Liverpool | | 470 | | | | 0 | 0 | 630 | 0 | Y | |
| YMT | > | Agustín Fabián RUBERTO | St | ARG | 45 | 88 | 14/01/06 (19) | 88 | 1.83 | 80 | Liverpool | | 470 | | | | 0 | 0 | 620 | 0 | Y | |
| Cercle Brugge 1,995,000 < > Cambridge United |
| VTL | > | Paris BRUNNER | St | GER | 48 | 84 | 15/02/06 (19) | 83 | 1.86 | 74 | Cambridge United | | 670 | | | | 0 | 0 | 965 | 0 | Y | |
 Tijuana 3,275,000 < > Coventry City |
| EPN | > | Gilberto Rafael MORA Zambrano | AM | MEX | 53 | 73 | 14/10/08 (16) | 87 | 1.68 | 62 | Coventry City | | 1490 | | | | 0 | 0 | 2170 | 0 | Y | |
| Gillingham 195,000 < > Coventry City |
| WBR | > | Naif AGUERD | CB | MAR | 65 | 99 | 30/03/96 (29) | 90 | 1.88 | 73 | Coventry City | 6.96 | 23400 | | | | 0 | 0 | 2975 | 0 | +1 | |
| GJN | < | Sebastiaan BORNAUW | CB | BEL | 62 | 92 | 22/03/99 (26) | 84 | 1.90 | 82 | Gillingham | | 10260 | | | | 0 | 0 | 2340 | 0 | | |
| BMF | < | Boubakary SOUMARÉ | DM/CM | FRA | 62 | 95 | 27/02/99 (26) | 86 | 1.88 | 82 | Gillingham | | 10960 | | | | 0 | 0 | 2340 | 0 | | |
 SK Zápy < > 6,780,000 QPR |
| AZO | < | Adam HLOZEK | St | CZE | 63 | 15 | 25/07/02 (23) | 91 | 1.86 | 81 | SK Zápy | | | | | | | | 5850 | | | |
| Tranmere Rovers 100,000 < > Stevenage |
| DND | > | Mason MOUNT | AM/CM | ENG | 63 | 85 | 10/01/99 (26) | 94 | 1.78 | 64 | Stevenage | | 14940 | | | | 0 | 0 | 3980 | 1 | +4 | |
| UYW | < | Ricardo PEPI | CS | USA | 62 | 94 | 09/01/03 (22) | 97 | 1.85 | 77 | Tranmere Rovers | | 11160 | | | | 0 | 0 | 5635 | 0 | | |
| 265,000 < > Stevenage |
| MBT | > | Louis PAGE | CM | ENG | 37 | 72 | 24/10/08 (16) | 90 | | | Stevenage | | 150 | | | | 0 | 0 | 195 | 0 | Y | |
 PEC Zwolle < > 2,310,000 Northampton Town |
| PMR | < | Zian FLEMMING | CS/AM | NED | 59 | 12 | 01/08/98 (27) | 94 | 1.83 | 84 | PEC Zwolle | | | | | | | | 2415 | | | |
| Cheltenham Town 500,000 < > Bradford City |
| EIY | > | Fraser TAYLOR | AM/LW | SCO | 45 | 95 | 20/02/03 (22) | 90 | | | Bradford City | | 740 | | | | 2 | 0 | 365 | 0 | +4 | |
| Runcorn 4,250,000 < > Bradford City |
| XHP | > | Djeidi GASSAMA | CS | FRA | 56 | 73 | 10/09/03 (21) | 89 | 1.78 | 70 | Bradford City | | 4100 | | | | 0 | 0 | 2595 | 0 | +4 | |
| Kilmarnock 90,000 < > Bradford City |
| ETG | > | Eddie BEACH | Gk | WAL | 38 | 92 | 09/10/03 (21) | 93 | 1.96 | 84 | Bradford City | | 320 | | | | 0 | 0 | 65 | 0 | +4 | |
| 1,600,000 < > Sheffield United |
| GPV | > | Kieran MORGAN | DM | ENG | 53 | 89 | 17/03/06 (19) | 90 | | | Sheffield United | | 1430 | | | | 0 | 0 | 1170 | 0 | Y | |
| Wigan Athletic 2,750,000 < > Sheffield United |
| YIG | > | Charlie HUGHES | CB | ENG | 54 | 85 | 16/10/03 (21) | 94 | | | Sheffield United | 6.33 | 2950 | | | | 0 | 0 | 1125 | 0 | +4 | |
| Reading < > 600,000 Cheltenham Town |
| QAW | < | Jack TURNER | CM | ENG | 46 | 93 | 07/09/02 (22) | 93 | | | Reading | | 850 | | | | 2 | 0 | 435 | 0 | +4 | |
| SV Werder Bremen 16,000,000 < > Bolton Wanderers |
| LRG | > | Nick WOLTEMADE | CS | GER | 62 | 93 | 14/02/02 (23) | 87 | 1.96 | 76 | Bolton Wanderers | | 12460 | | | | 0 | 0 | 5060 | 0 | +3 | |
| N.E. Revolution 3,400,000 < > Preston North End |
| BHJ | > | Esmir BAJRAKTAREVIC | RW | BIH | 56 | 97 | 10/03/05 (20) | 86 | 1.75 | 64 | Preston North End | | 2240 | | | | 0 | 0 | 2450 | 0 | Y | |
| Osasuna 4,100,000 < > Tottenham Hotspur |
| TMV | > | Flavien Enzo BOYOMO | CB | CMR | 62 | 89 | 07/10/01 (23) | 92 | 1.81 | 70 | Tottenham Hotspur | | 12560 | | | | 0 | 0 | 2950 | 0 | +1 | |
| 866,000 < > Burnley |
| GAR | > | Abu KAMARA | RW | ENG | 54 | 94 | 21/07/03 (22) | 93 | | | Burnley | | 3100 | | | | 0 | 0 | 1500 | 0 | | |
| Slavia Praha 1,120,000 < > Tranmere Rovers |
| OYN | > | Kieran TRIPPIER | RWB | ENG | 65 | 75 | 19/09/90 (34) | 93 | 1.77 | 69 | Tranmere Rovers | | 21000 | | | | 0 | 0 | 870 | 0 | +1 | |
| Loan/transfer listed |
| CHJ | - | Noah OKAFOR | St | SUI | 61/62 | 95 | 24/05/00 (25) | 79 | 1.85 | 85 | Hull City | | 11260 | | | T | 0 | 0 | 4245 | 0 | +2 | |
| BYY | - | Terem MOFFI | CS | NGA | 63 | 94 | 25/05/99 (26) | 94 | 1.88 | 87 | Hull City | 6.38 | 14940 | | | T | 3 | 0 | 4635 | 1 | +1 | |
| HMX | - | Darwin Gabriel NÚÑEZ Ribeiro | St | URU | 66 | 96 | 24/06/99 (26) | 91 | 1.87 | 78 | Norwich City | 6.95 | 24520 | | | T | 2 | 0 | 7155 | 5 | +1 | |
| ZNL | - | Rodrigo Javier DE PAUL | CM/AM | ARG | 66 | 98 | 24/05/94 (31) | 91 | 1.78 | 78 | Norwich City | 7.00 | 34560 | | | T | 0 | 1 | 4355 | 0 | +1 | |
| DQP | - | DEIVID WASHINGTON de Souza Eugênio | LW/CS | BRA | 50/52 | 95 | 05/06/05 (20) | 76 | | | Norwich City | | 1330 | | | T | 0 | 0 | 1365 | 0 | Y | |
| LLM | - | RICARDO de Sousa ESGAIO | RWB | POR | 61 | 93 | 16/05/93 (32) | 93 | 1.71 | 66 | Exeter City | | 13160 | | | T | 0 | 0 | 1085 | 1 | | |
| KHX | - | Julián Vicente ARAUJO Zúñiga | RB | MEX | 61 | 96 | 13/08/01 (24) | 89 | 1.75 | 70 | Port Vale | 7.00 | 9620 | | | T | 0 | 0 | 2265 | 0 | +3 | |
| KZZ | 3 | Mouhamadou 'Habib' DIARRA | CM/AM | SEN | 64 | 98 | 03/01/04 (21) | 90 | 1.79 | 74 | Port Vale | 6.35 | 14340 | | | T | 0 | 1 | 7090 | 0 | +4 | |
| QPW | - | Raheem STERLING | W | ENG | 64 | 76 | 08/12/94 (30) | 94 | 1.70 | 63 | Port Vale | 6.36 | 22600 | 3 | | T | 5 | 0 | 3520 | 2 | +3 | |
| ARP | - | Kai FOTHERINGHAM | WS | SCO | 46 | 94 | 18/04/03 (22) | 88 | 1.69 | 54 | Forest Green | | 910 | | | T | 0 | 0 | 515 | 0 | | |
| KMP | - | Thimothée LO-TUTALA | Gk | FRA | 45 | 47 | 13/02/03 (22) | 93 | 1.85 | 71 | Sheffield United | | 810 | 2 | | T | 0 | 0 | 275 | 0 | +2 | |
| MGH | - | Alfie GILCHRIST | CB | ENG | 56 | 88 | 28/11/03 (21) | 92 | | | Sheffield United | | 3400 | | | T | 0 | 0 | 1515 | 0 | | |
| SEW | - | Malcolm EBIOWEI | W | ENG | 48 | 98 | 04/09/03 (21) | 93 | | | Sheffield United | | 2020 | | | T | 0 | 0 | 675 | 0 | | |
| GFT | - | Karoy ANDERSON | CM/DM | JAM | 49 | 92 | 01/10/04 (20) | 94 | | | Blackburn Rovers | 6.83 | 1410 | | | T | 1 | 0 | 870 | 0 | | |
| LIM | - | Ephraim YEBOAH | CS | ENG | 43 | 94 | 21/07/06 (19) | 95 | | | Blackburn Rovers | | 290 | | | T | 0 | 0 | 455 | 0 | Y | |
| JJT | - | Murray JOHNSON | Gk | SCO | 41 | 95 | 13/11/04 (20) | 88 | | | Cheltenham Town | | 210 | | | T | 0 | 0 | 160 | 0 | Y | |
| Released |
| KPN | 16 | Mattia LIBERALI | AM/RW | ITA | 41 | 2 | 06/04/07 (18) | 87 | | | Milan | | | | | | | | 310 | | | |
| RYI | 25+ | Jack MOORHOUSE | CM | IRL | 37 | 2 | 29/11/05 (19) | 95 | | | Frickley Athletic | | | | | | | | 125 | | | |
| MMM | 25+ | Ryan PORTEOUS | CB | SCO | 58 | 1 | 25/03/99 (26) | 92 | 1.85 | 68 | Los Angeles | | | | | | | | 1290 | | | |
| SNS | <20 | Gerald TAYLOR Dosman | CB | CRC | 52 | 11 | 28/05/01 (24) | 88 | | | Saprissa | | | | | | | | 570 | | | |
| PQL | 25+ | Adam SENIOR | CB | ENG | 41 | 11 | 20/01/02 (23) | 96 | 1.83 | 68 | Barnet | | | | | | | | 65 | | | |
